MLOC_57363 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1902160.0334970.07030250.0986258
LEAShoots from the seedlings (10 cm shoot stage)00.09102690.03168080.0941052
INF1Young developing inflorescences (5mm)0.027316600.05349120.0478569
INF2Developing inflorescences (1-1.5 cm)0.01527060.01403340.05630830.0408151
ROORoots from the seedlings (10 cm shoot stage)0.1992390.2803020.09439790.403852
NODDeveloping tillers at six leaf stage, 3rd internode0.3917620.4450191.47972.26891
CAR5Developing grain, bracts removed (5 DPA)1.118681.389021.665571.82743
CAR15Developing grain, bracts removed (15 DPA)82.573779.245651.1583217.483



CDS Structure of MLOC_57363






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57363.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356723NoneNoneNoneNone
MLOC_57363.1CUST_3752_PI427708080AvailableAvailablecontig_41686 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g21790.1 +1 0.0 573 309/489 (63%) 13103.m02617 protein cupin domain containing protein, expressed
TAIR PP10 AT2G28490.1 +1 2e-112 350 198/441 (45%) RmlC-like cupins superfamily protein | chr2:12178812-12180983 REVERSE LENGTH=511