- Predicted Gene MLOC_57360
MLOC_57360 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.5222 | 12.4121 | 10.9553 | 16.4979 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.0214 | 0.513313 | 0.639823 | 1.5473 |
| INF1 | Young developing inflorescences (5mm) | 35.9366 | 32.7924 | 25.6356 | 34.4129 |
| INF2 | Developing inflorescences (1-1.5 cm) | 20.8964 | 27.8827 | 19.712 | 37.289 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.11278 | 6.14017 | 6.2577 | 11.8692 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.145813 | 0.160752 | 0.0417674 | 0.636716 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.35342 | 8.02671 | 7.94303 | 11.5249 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.458891 | 0.326007 | 0.724231 | 1.45415 |
CDS Structure of MLOC_57360
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57360.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g15810.1 |
-1 |
3e-151 |
452 |
338/542 (62%) |
13102.m01762 protein HMG1/2, putative, expressed |
| TAIR PP10 |
AT4G23800.2 |
-1 |
2e-116 |
360 |
233/429 (54%) |
HMG (high mobility group) box protein | chr4:12390228-12392516 FORWARD LENGTH=450 |