MLOC_57353 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.412525.241615.408174.90993
LEAShoots from the seedlings (10 cm shoot stage)5.505933.456952.62853.39054
INF1Young developing inflorescences (5mm)6.410629.6673410.92226.69791
INF2Developing inflorescences (1-1.5 cm)8.46158.8699910.23299.47975
ROORoots from the seedlings (10 cm shoot stage)2.026812.701972.263043.221
NODDeveloping tillers at six leaf stage, 3rd internode2.088783.016971.401739.92054
CAR5Developing grain, bracts removed (5 DPA)2.962163.698013.740463.30089
CAR15Developing grain, bracts removed (15 DPA)0.795860.5876061.120381.60073



CDS Structure of MLOC_57353






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367199
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367199CUST_21427_PI427708080NoneNoneNone
MLOC_27900.1NoneAvailableNonecontig_187237 (Mapped)
MLOC_48656.1NoneAvailableNonecontig_32745 (Not mapped)
MLOC_57353.2NoneAvailableAvailablecontig_41671 (Mapped)
MLOC_78159.2NoneAvailableNonecontig_78946 (Mapped)
MLOC_9698.1NoneAvailableNonecontig_154750 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----