MLOC_5735 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 17 | 13.1557 | 17.812 | 15.1519 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 25.256 | 6.68147 | 13.3299 | 11.996 |
| INF1 | Young developing inflorescences (5mm) | 0.263623 | 0.170799 | 0.480501 | 0.277136 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.354644 | 0.318325 | 0.209634 | 0.362514 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 64.9763 | 48.0264 | 57.7944 | 55.4852 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 47.1073 | 63.0192 | 11.6423 | 128.682 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 171.386 | 208.593 | 177.622 | 195.136 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.55173 | 4.60348 | 9.68798 | 16.1892 |
CDS Structure of MLOC_5735
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5735.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g04010.1 |
-3 |
1e-146 |
429 |
227/345 (66%) |
13111.m00345 protein ICE-like protease p20 domain containing protein, putative, expressed |
| TAIR PP10 |
AT5G04200.1 |
-3 |
4e-100 |
308 |
173/331 (52%) |
| Symbols: AtMC9, MC9 | metacaspase 9 | chr5:1153893-1154870 FORWARD LENGTH=325 |
