- Predicted Gene MLOC_57344
MLOC_57344 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 502.087 | 340.671 | 313.192 | 435.084 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 251.232 | 145.935 | 182.965 | 184.776 |
| INF1 | Young developing inflorescences (5mm) | 652.828 | 647.336 | 724.589 | 647.469 |
| INF2 | Developing inflorescences (1-1.5 cm) | 666.788 | 629.975 | 715.947 | 829.844 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 300.465 | 357.352 | 351.801 | 518.084 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 73.1657 | 105.178 | 189.832 | 450.026 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 370.306 | 370.052 | 363.424 | 422.649 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 202.356 | 177.174 | 212.399 | 518.17 |
CDS Structure of MLOC_57344
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57344.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g49030.1 |
+3 |
5e-124 |
356 |
169/178 (95%) |
13105.m05238 protein 60S ribosomal protein L18a, putative, expressed |
| TAIR PP10 |
AT2G34480.1 |
+3 |
7e-117 |
337 |
162/178 (91%) |
Ribosomal protein L18ae/LX family protein | chr2:14532916-14534161 REVERSE LENGTH=178 |