- Predicted Gene MLOC_57334
MLOC_57334 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57334_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57334_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 254.095 | 349.917 | 311.763 | 354.048 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 576.275 | 222.824 | 182.452 | 310.713 |
INF1 | Young developing inflorescences (5mm) | 376.982 | 301.969 | 302.751 | 298.577 |
INF2 | Developing inflorescences (1-1.5 cm) | 182.658 | 204.673 | 204.936 | 236.748 |
ROO | Roots from the seedlings (10 cm shoot stage) | 66.6122 | 114.25 | 100.971 | 155.759 |
NOD | Developing tillers at six leaf stage, 3rd internode | 89.8422 | 95.8307 | 154.62 | 423.966 |
CAR5 | Developing grain, bracts removed (5 DPA) | 346.991 | 323.563 | 350.325 | 368.212 |
CAR15 | Developing grain, bracts removed (15 DPA) | 69.394 | 68.9196 | 65.5741 | 164.65 |
CDS Structure of MLOC_57334
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57334.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g02380.2 |
-3 |
0.0 |
1058 |
567/601 (94%) |
13106.m00160 protein T-complex protein, putative, expressed |
TAIR PP10 |
AT1G55490.2 |
-3 |
0.0 |
941 |
509/600 (85%) |
| Symbols: CPN60B, LEN1 | chaperonin 60 beta | chr1:20715717-20718673 REVERSE LENGTH=600 |