MLOC_57328 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains45.024947.1449.170646.9736
LEAShoots from the seedlings (10 cm shoot stage)27.727516.021512.483815.6475
INF1Young developing inflorescences (5mm)21.73325.059224.87319.9099
INF2Developing inflorescences (1-1.5 cm)33.823837.663737.309939.7383
ROORoots from the seedlings (10 cm shoot stage)11.433315.103513.43216.9736
NODDeveloping tillers at six leaf stage, 3rd internode37.461229.774250.185105.066
CAR5Developing grain, bracts removed (5 DPA)108.583122.77127.524117.251
CAR15Developing grain, bracts removed (15 DPA)146.095143.93138.996342.14



CDS Structure of MLOC_57328






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57328.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357143NoneNoneNoneNone
MLOC_57328.1CUST_3746_PI427708080AvailableAvailablecontig_41650 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g12660.2 -3 0.0 877 437/467 (94%) 13109.m01152 protein glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed
TAIR PP10 AT5G48300.1 -3 0.0 822 401/467 (86%) | Symbols: ADG1, APS1 | ADP glucose pyrophosphorylase 1 | chr5:19570326-19572557 FORWARD LENGTH=520