- Predicted Gene MLOC_57298
MLOC_57298 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 76.5812 | 63.8261 | 62.6183 | 70.0073 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 50.305 | 36.4055 | 42.9331 | 38.1736 |
| INF1 | Young developing inflorescences (5mm) | 61.3698 | 58.3072 | 54.9834 | 50.9923 |
| INF2 | Developing inflorescences (1-1.5 cm) | 47.6264 | 48.8316 | 48.6129 | 53.7835 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 83.4917 | 79.5713 | 59.9171 | 98.8934 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 39.4364 | 44.218 | 58.6097 | 157.357 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 90.7093 | 94.9184 | 92.2884 | 92.987 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 34.9943 | 35.3779 | 34.9804 | 80.7622 |
CDS Structure of MLOC_57298
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57298.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g48750.2 |
+1 |
0.0 |
806 |
405/412 (98%) |
13106.m05188 protein DEAD-box ATP-dependent RNA helicase, putative, expressed |
| TAIR PP10 |
AT3G13920.1 |
+1 |
0.0 |
758 |
379/412 (92%) |
| Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation initiation factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=412 |