MLOC_57293 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.144043.255143.611073.69714
LEAShoots from the seedlings (10 cm shoot stage)2.094360.1665491.008250.864758
INF1Young developing inflorescences (5mm)2.363141.937171.846061.78992
INF2Developing inflorescences (1-1.5 cm)1.542821.822852.268612.00232
ROORoots from the seedlings (10 cm shoot stage)1.766021.687081.697891.76565
NODDeveloping tillers at six leaf stage, 3rd internode0.4387880.3099050.2830360.777672
CAR5Developing grain, bracts removed (5 DPA)4.735164.923014.118764.42297
CAR15Developing grain, bracts removed (15 DPA)3.122642.93782.794347.41465



CDS Structure of MLOC_57293






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57293.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376892NoneNoneNoneNone
MLOC_57293.1CUST_3742_PI427708080AvailableAvailablecontig_41610 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g31430.1 -2 7e-175 503 265/307 (86%) 13107.m03179 protein phosphate-induced protein 1 conserved region domain containing protein, expressed
TAIR PP10 AT2G17230.1 -2 1e-103 320 164/292 (56%) | Symbols: EXL5 | EXORDIUM like 5 | chr2:7494892-7495983 REVERSE LENGTH=363