- Predicted Gene MLOC_57289
MLOC_57289 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.99978 | 1.28095 | 1.33855 | 1.57411 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.9978 | 25.1879 | 39.4951 | 23.1601 |
| INF1 | Young developing inflorescences (5mm) | 1.50849 | 1.45613 | 1.56313 | 1.46038 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.645358 | 0.682332 | 0.883182 | 0.90379 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.225484 | 0.127465 | 0.811835 | 0.281657 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.72599 | 8.30003 | 10.8356 | 26.8078 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.82464 | 7.1689 | 5.28649 | 6.64699 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.533277 | 0.671565 | 0.9703 | 1.92508 |
CDS Structure of MLOC_57289
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57289.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g41190.1 |
+3 |
1e-64 |
205 |
108/170 (64%) |
13105.m04368 protein expressed protein |
| TAIR PP10 |
AT3G51510.1 |
+3 |
2e-50 |
167 |
76/118 (64%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr3:19109118-19109842 FORWARD LENGTH=181 |