MLOC_57285 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.660512.030911.412312.4547
LEAShoots from the seedlings (10 cm shoot stage)9.931155.011576.100576.15643
INF1Young developing inflorescences (5mm)24.396521.684222.544219.9642
INF2Developing inflorescences (1-1.5 cm)20.399922.155122.85224.531
ROORoots from the seedlings (10 cm shoot stage)6.7209110.916711.127312.8446
NODDeveloping tillers at six leaf stage, 3rd internode10.991311.546710.911636.69
CAR5Developing grain, bracts removed (5 DPA)13.809313.856314.096913.9789
CAR15Developing grain, bracts removed (15 DPA)3.242682.474632.851186.92657



CDS Structure of MLOC_57285






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57285.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368165NoneNoneNoneNone
MLOC_57285.1CUST_3740_PI427708080AvailableAvailablecontig_41604 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g37160.1 -3 0.0 649 377/443 (85%) 13105.m03864 protein tubulin/FtsZ domain containing protein, putative, expressed
TAIR PP10 AT2G36250.2 -3 6e-175 532 310/426 (73%) | Symbols: FTSZ2-1, ATFTSZ2-1 | Tubulin/FtsZ family protein | chr2:15197661-15199932 REVERSE LENGTH=478