MLOC_57284 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains59.867235.368740.123848.3805
LEAShoots from the seedlings (10 cm shoot stage)20.844525.309350.911829.5626
INF1Young developing inflorescences (5mm)16.769219.681517.563618.2022
INF2Developing inflorescences (1-1.5 cm)14.253113.891615.291118.5019
ROORoots from the seedlings (10 cm shoot stage)259.304130.093161.118192.738
NODDeveloping tillers at six leaf stage, 3rd internode30.042238.133240.6305118.955
CAR5Developing grain, bracts removed (5 DPA)27.498230.882627.359734.1336
CAR15Developing grain, bracts removed (15 DPA)12.112213.132311.487233.9954



CDS Structure of MLOC_57284






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57284.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358527NoneNoneNoneNone
MLOC_57284.1CUST_3739_PI427708080AvailableAvailablecontig_41604 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g37140.2 -1 1e-85 260 127/151 (84%) 13105.m03861 protein 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed
TAIR PP10 AT2G27510.1 -1 2e-45 156 76/155 (49%) | Symbols: ATFD3, FD3 | ferredoxin 3 | chr2:11758281-11758748 REVERSE LENGTH=155