MLOC_57283 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9951910.5680760.3282490.595097
LEAShoots from the seedlings (10 cm shoot stage)1.006532.063074.108531.83419
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.0245931000.0309022
ROORoots from the seedlings (10 cm shoot stage)4.500374.023573.413624.18385
NODDeveloping tillers at six leaf stage, 3rd internode0.1397440.1095780.8908350.747111
CAR5Developing grain, bracts removed (5 DPA)0.1542670.05914690.02912790.0808257
CAR15Developing grain, bracts removed (15 DPA)0.3969370.5481090.1501741.02581



CDS Structure of MLOC_57283






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57283.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357028NoneNoneNoneNone
MLOC_57283.1CUST_3738_PI427708080AvailableAvailablecontig_41604 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g64170.3 -2 1e-158 462 238/325 (73%) 13101.m06902 protein glycosyl hydrolases family 17, putative, expressed
TAIR PP10 AT2G27500.2 -2 1e-125 376 185/318 (58%) Glycosyl hydrolase superfamily protein | chr2:11752615-11753844 REVERSE LENGTH=377