- Predicted Gene MLOC_57282
MLOC_57282 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 17.0985 | 22.9539 | 24.6483 | 19.8661 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 17.6116 | 17.4344 | 18.6424 | 14.4495 |
| INF1 | Young developing inflorescences (5mm) | 46.4172 | 48.2675 | 50.2669 | 36.087 |
| INF2 | Developing inflorescences (1-1.5 cm) | 45.1637 | 54.1191 | 53.3703 | 48.9465 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 17.1898 | 21.9858 | 19.7443 | 23.0403 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.2556 | 13.9958 | 17.6414 | 45.8503 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 27.0852 | 25.3676 | 26.9979 | 22.1141 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 21.2431 | 18.7448 | 18.4968 | 39.8776 |
CDS Structure of MLOC_57282
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57282.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g03610.4 |
+2 |
0.0 |
645 |
324/407 (80%) |
13109.m00283 protein flowering time control protein FCA, putative, expressed |
| TAIR PP10 |
AT4G16280.3 |
+2 |
3e-104 |
338 |
195/411 (47%) |
| Symbols: FCA | RNA binding;abscisic acid binding | chr4:9208564-9214412 REVERSE LENGTH=533 |