- Predicted Gene MLOC_57271
MLOC_57271 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57271_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57271_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 28.3822 | 33.4871 | 30.9342 | 35.1467 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 23.4037 | 16.4006 | 15.7746 | 16.0273 |
INF1 | Young developing inflorescences (5mm) | 63.5093 | 71.4944 | 70.9672 | 64.7005 |
INF2 | Developing inflorescences (1-1.5 cm) | 81.8137 | 79.687 | 72.6869 | 94.8387 |
ROO | Roots from the seedlings (10 cm shoot stage) | 24.0211 | 24.2354 | 24.3893 | 30.4085 |
NOD | Developing tillers at six leaf stage, 3rd internode | 24.8037 | 30.2757 | 29.4264 | 93.6577 |
CAR5 | Developing grain, bracts removed (5 DPA) | 36.987 | 38.4512 | 34.7553 | 39.9305 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.82662 | 3.57956 | 4.48905 | 11.2175 |
CDS Structure of MLOC_57271
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57271.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g47640.1 |
-3 |
0.0 |
625 |
365/431 (85%) |
13102.m05373 protein OsFBT4 - F-box and tubby domain containing protein, expressed |
TAIR PP10 |
AT2G18280.2 |
-3 |
2e-123 |
378 |
240/430 (56%) |
| Symbols: AtTLP2, TLP2 | tubby like protein 2 | chr2:7946754-7948176 FORWARD LENGTH=394 |