- Predicted Gene MLOC_57270
MLOC_57270 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.57647 | 8.37147 | 9.88769 | 8.28025 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.7168 | 16.0223 | 26.3676 | 13.5175 |
| INF1 | Young developing inflorescences (5mm) | 3.1703 | 3.34387 | 3.43686 | 2.61963 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.11355 | 3.45493 | 4.08425 | 3.45954 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 29.6725 | 20.1739 | 24.9724 | 23.0271 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 16.3025 | 24.2501 | 26.4666 | 65.5059 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.06844 | 2.27899 | 1.89365 | 1.85404 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.13392 | 0.828152 | 0.658213 | 2.06761 |
CDS Structure of MLOC_57270
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57270.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g47650.1 |
-1 |
4e-88 |
286 |
155/183 (85%) |
13102.m05374 protein universal stress protein domain containing protein, putative, expressed |
| TAIR PP10 |
AT2G21620.1 |
-1 |
3e-71 |
238 |
130/180 (72%) |
| Symbols: RD2 | Adenine nucleotide alpha hydrolases-like superfamily protein | chr2:9248749-9249986 FORWARD LENGTH=187 |
