- Predicted Gene MLOC_57269
MLOC_57269 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57269_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57269_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.48826 | 2.07468 | 1.99304 | 1.56273 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.79941 | 1.8969 | 2.48424 | 2.19859 |
INF1 | Young developing inflorescences (5mm) | 0.353225 | 0.383088 | 0.499371 | 0.337984 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.738922 | 0.702668 | 0.837359 | 0.806515 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.50754 | 2.03932 | 2.62466 | 2.01889 |
NOD | Developing tillers at six leaf stage, 3rd internode | 22.7205 | 8.26621 | 7.39741 | 21.1748 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.218829 | 0.314578 | 0.123769 | 0.210835 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0995079 | 0.0847343 | 0.0593368 | 0.18895 |
CDS Structure of MLOC_57269
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57269.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g47660.1 |
+1 |
4e-73 |
253 |
202/361 (56%) |
13102.m05375 protein basic helix-loop-helix, putative, expressed |
TAIR PP10 |
AT4G34530.1 |
+1 |
4e-30 |
125 |
74/99 (75%) |
| Symbols: CIB1 | cryptochrome-interacting basic-helix-loop-helix 1 | chr4:16498466-16499946 FORWARD LENGTH=335 |