- Predicted Gene MLOC_57260
MLOC_57260 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57260_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57260_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 22.795 | 20.0529 | 17.657 | 17.44 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 19.5627 | 3.74174 | 4.50261 | 6.87881 |
INF1 | Young developing inflorescences (5mm) | 17.5386 | 24.0579 | 22.7329 | 17.5478 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.96154 | 11.5094 | 8.62073 | 10.05 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.8193 | 12.3528 | 13.0132 | 11.0792 |
NOD | Developing tillers at six leaf stage, 3rd internode | 12.0517 | 8.97724 | 0.826 | 13.9127 |
CAR5 | Developing grain, bracts removed (5 DPA) | 23.2944 | 25.642 | 21.4746 | 21.811 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.838207 | 0.770821 | 0.528016 | 1.83141 |
CDS Structure of MLOC_57260
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57260.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g41290.1 |
+1 |
6e-87 |
271 |
133/162 (82%) |
13108.m04431 protein AIR12, putative, expressed |
TAIR PP10 |
AT3G07390.1 |
+1 |
1e-39 |
145 |
73/148 (49%) |
| Symbols: AIR12 | auxin-responsive family protein | chr3:2365452-2366273 FORWARD LENGTH=273 |