MLOC_57254 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.175519.3488310.419310.5313
LEAShoots from the seedlings (10 cm shoot stage)8.484836.410594.799956.09927
INF1Young developing inflorescences (5mm)2.073372.112051.79131.85255
INF2Developing inflorescences (1-1.5 cm)2.465943.228843.043563.53837
ROORoots from the seedlings (10 cm shoot stage)12.147814.930511.211719.3198
NODDeveloping tillers at six leaf stage, 3rd internode3.394463.884316.2873316.3944
CAR5Developing grain, bracts removed (5 DPA)1.886342.229282.262242.29774
CAR15Developing grain, bracts removed (15 DPA)0.6950860.9203350.8296342.00044



CDS Structure of MLOC_57254






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57254.8
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK377139NoneNoneNoneNone
MLOC_57254.8CUST_3730_PI427708080AvailableAvailablecontig_41573 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g73580.1 +1 0.0 1019 481/549 (88%) 13101.m08029 protein glycosyl hydrolases, putative, expressed
TAIR PP10 AT3G13790.1 +1 0.0 584 291/544 (53%) | Symbols: ATCWINV1, ATBFRUCT1 | Glycosyl hydrolases family 32 protein | chr3:4533084-4535831 REVERSE LENGTH=584