- Predicted Gene MLOC_57231
MLOC_57231 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.7001 | 10.4512 | 10.374 | 10.5264 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.9799 | 9.70772 | 9.31133 | 7.27254 |
| INF1 | Young developing inflorescences (5mm) | 0.105005 | 0.281471 | 0.487356 | 0.222523 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.155332 | 0.111724 | 0.323728 | 0.182971 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 46.6479 | 46.758 | 41.3911 | 49.5549 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 108.053 | 128.328 | 198.965 | 402.151 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.73049 | 2.8089 | 3.35148 | 2.72796 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.58807 | 3.71752 | 3.13925 | 8.17006 |
CDS Structure of MLOC_57231
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57231.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g54800.1 |
-1 |
6e-140 |
418 |
227/301 (75%) |
13104.m05672 protein shikimate kinase, putative, expressed |
| TAIR PP10 |
AT2G21940.5 |
-1 |
3e-79 |
259 |
132/221 (60%) |
| Symbols: SK1, ATSK1 | shikimate kinase 1 | chr2:9351106-9352881 FORWARD LENGTH=303 |