- Predicted Gene MLOC_57229
MLOC_57229 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57229_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57229_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.24153 | 2.22227 | 2.66549 | 2.68834 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.435699 | 0.111351 | 0.0376379 | 0.158125 |
INF1 | Young developing inflorescences (5mm) | 2.21505 | 1.01955 | 1.9183 | 1.57659 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0676522 | 0.0473721 | 0.038793 | 0.0665053 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.24596 | 1.72753 | 1.56888 | 2.21394 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.0191 | 2.6341 | 0.135166 | 4.66093 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.79232 | 1.0636 | 1.00452 | 1.38525 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.114231 | 0.0905515 | 0.0182157 | 0.219044 |
CDS Structure of MLOC_57229
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57229.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g45260.1 |
-1 |
1e-160 |
473 |
255/328 (78%) |
13107.m04767 protein glycosyl transferase 8 domain containing protein, putative, expressed |
TAIR PP10 |
AT3G06260.1 |
-1 |
3e-137 |
411 |
206/310 (66%) |
| Symbols: GATL4 | galacturonosyltransferase-like 4 | chr3:1893804-1894859 REVERSE LENGTH=351 |