MLOC_57227 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains61.458486.707188.679874.5231
LEAShoots from the seedlings (10 cm shoot stage)84.537537.41942.600247.5455
INF1Young developing inflorescences (5mm)103.34794.497597.937575.1357
INF2Developing inflorescences (1-1.5 cm)75.960172.634171.710574.128
ROORoots from the seedlings (10 cm shoot stage)40.278257.127750.090361.8608
NODDeveloping tillers at six leaf stage, 3rd internode117.311128.119126.991425.577
CAR5Developing grain, bracts removed (5 DPA)66.348160.58962.839856.2319
CAR15Developing grain, bracts removed (15 DPA)43.168338.067842.457382.292



CDS Structure of MLOC_57227






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364106
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364106CUST_20835_PI427708080NoneNoneNone
MLOC_20858.1NoneAvailableNonecontig_1592035 (Mapped)
MLOC_57227.1NoneAvailableAvailablecontig_41536 (Mapped)
MLOC_59455.1NoneAvailableNonecontig_43612 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----