- Predicted Gene MLOC_57217
MLOC_57217 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.36177 | 5.36021 | 4.41505 | 5.04438 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.45861 | 4.00081 | 4.45466 | 4.23153 |
| INF1 | Young developing inflorescences (5mm) | 8.7646 | 8.15988 | 7.99783 | 8.2186 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.813 | 9.84408 | 8.82924 | 12.5566 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.89658 | 5.65645 | 4.49045 | 7.43375 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.86106 | 1.93883 | 2.0377 | 8.2036 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.63655 | 6.96766 | 6.24075 | 7.65154 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.93351 | 2.59316 | 2.54653 | 7.28161 |
CDS Structure of MLOC_57217
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57217.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g63670.2 |
-3 |
0.0 |
1078 |
724/970 (75%) |
13103.m07060 protein expressed protein |
| TAIR PP10 |
AT5G08550.1 |
-3 |
7e-176 |
556 |
383/861 (44%) |
| Symbols: ILP1 | GC-rich sequence DNA-binding factor-like protein | chr5:2765981-2770282 REVERSE LENGTH=908 |
