MLOC_57215 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.418561.593471.399261.36214
LEAShoots from the seedlings (10 cm shoot stage)4.114542.697243.27942.51539
INF1Young developing inflorescences (5mm)0.4885260.1270880.08896060.202606
INF2Developing inflorescences (1-1.5 cm)0.07891310.2090380.5461730.247123
ROORoots from the seedlings (10 cm shoot stage)2.311040.8628071.257171.15057
NODDeveloping tillers at six leaf stage, 3rd internode0.2103360.3772290.3573910.898256
CAR5Developing grain, bracts removed (5 DPA)1.140941.320981.269721.33372
CAR15Developing grain, bracts removed (15 DPA)0.2302020.07323630.1099460.349019



CDS Structure of MLOC_57215






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57215.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57215.1CUST_13654_PI427708080AvailableAvailablecontig_41521 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g66490.1 -2 2e-153 456 281/404 (70%) 13101.m07197 protein no apical meristem protein, putative, expressed
TAIR PP10 AT2G02450.1 -2 2e-97 307 144/170 (85%) | Symbols: ANAC034, ANAC035, LOV1, NAC035 | NAC domain containing protein 35 | chr2:648044-650649 FORWARD LENGTH=379