MLOC_57214 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.02745090.04100670.1520720.069198
LEAShoots from the seedlings (10 cm shoot stage)0.5546460.1956750.0759320.265885
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.1999390.3003560.6436770.420549
NODDeveloping tillers at six leaf stage, 3rd internode0.2816350.419822.105282.53934
CAR5Developing grain, bracts removed (5 DPA)0.02098770.05879030.2003550.0956731
CAR15Developing grain, bracts removed (15 DPA)0.5117270.2745130.3888231.08679



CDS Structure of MLOC_57214






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57214.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK377026NoneNoneNoneNone
MLOC_57214.1CUST_3722_PI427708080AvailableAvailablecontig_41521 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g66510.1 -2 0.0 744 369/482 (77%) 13101.m07199 protein MLO domain containing protein, putative, expressed
TAIR PP10 AT4G02600.2 -2 0.0 579 297/483 (61%) | Symbols: MLO1, ATMLO1 | Seven transmembrane MLO family protein | chr4:1144141-1147156 FORWARD LENGTH=526