MLOC_57212 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.650312.533110.864811.161
LEAShoots from the seedlings (10 cm shoot stage)14.402311.146512.174310.4691
INF1Young developing inflorescences (5mm)27.745226.195526.657621.8181
INF2Developing inflorescences (1-1.5 cm)28.776422.917926.205827.0139
ROORoots from the seedlings (10 cm shoot stage)9.7937116.12916.672116.9969
NODDeveloping tillers at six leaf stage, 3rd internode4.694776.222949.1137920.8118
CAR5Developing grain, bracts removed (5 DPA)19.335621.277320.629518.8401
CAR15Developing grain, bracts removed (15 DPA)12.176813.542111.7427.4924



CDS Structure of MLOC_57212






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57212.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364139NoneNoneNoneNone
MLOC_57212.3CUST_3721_PI427708080AvailableAvailablecontig_41521 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g66520.1 +3 0.0 700 390/494 (79%) 13101.m07200 protein serine/threonine-protein kinase RIO-like, putative, expressed
TAIR PP10 AT3G51270.1 +3 0.0 558 305/485 (63%) protein serine/threonine kinases;ATP binding;catalytics | chr3:19033851-19036772 FORWARD LENGTH=461