- Predicted Gene MLOC_57208
MLOC_57208 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.04876 | 1.71487 | 1.30239 | 1.20948 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.31129 | 2.40043 | 1.98149 | 1.62905 |
INF1 | Young developing inflorescences (5mm) | 5.8992 | 5.51744 | 6.67116 | 4.28627 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.88909 | 3.78017 | 3.36147 | 3.56814 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.3973 | 2.4676 | 2.55979 | 2.41057 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.948006 | 1.27807 | 2.6924 | 4.23254 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.53529 | 3.64081 | 3.26528 | 2.57884 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.824957 | 0.578076 | 0.461729 | 1.35751 |
CDS Structure of MLOC_57208
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57208.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g36220.1 |
-2 |
2e-82 |
270 |
176/413 (43%) |
13106.m03740 protein OsFBX198 - F-box domain containing protein, expressed |
TAIR PP10 | None | - | - | - | - | - |