MLOC_57208 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.048761.714871.302391.20948
LEAShoots from the seedlings (10 cm shoot stage)2.311292.400431.981491.62905
INF1Young developing inflorescences (5mm)5.89925.517446.671164.28627
INF2Developing inflorescences (1-1.5 cm)3.889093.780173.361473.56814
ROORoots from the seedlings (10 cm shoot stage)2.39732.46762.559792.41057
NODDeveloping tillers at six leaf stage, 3rd internode0.9480061.278072.69244.23254
CAR5Developing grain, bracts removed (5 DPA)2.535293.640813.265282.57884
CAR15Developing grain, bracts removed (15 DPA)0.8249570.5780760.4617291.35751



CDS Structure of MLOC_57208






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57208.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57208.1CUST_13652_PI427708080AvailableAvailablecontig_41518 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g36220.1 -2 2e-82 270 176/413 (43%) 13106.m03740 protein OsFBX198 - F-box domain containing protein, expressed
TAIR PP10None-----