- Predicted Gene MLOC_57173
MLOC_57173 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 37.5095 | 26.2738 | 22.4363 | 28.8332 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.8498 | 4.3223 | 8.31323 | 6.83952 |
| INF1 | Young developing inflorescences (5mm) | 51.2369 | 56.9984 | 45.9238 | 49.1742 |
| INF2 | Developing inflorescences (1-1.5 cm) | 36.4285 | 37.0204 | 36.2226 | 44.1693 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 26.8643 | 22.3435 | 20.0666 | 24.9275 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.45197 | 1.98026 | 6.64372 | 7.90543 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 25.7585 | 28.3337 | 25.1905 | 28.3516 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.87857 | 6.09208 | 4.92276 | 15.2657 |
CDS Structure of MLOC_57173
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57173.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g07220.1 |
-3 |
2e-57 |
192 |
155/167 (93%) |
13107.m00698 protein LSM domain containing protein, expressed |
| TAIR PP10 |
AT4G20440.4 |
-3 |
2e-43 |
154 |
121/164 (74%) |
small nuclear ribonucleoprotein associated protein B | chr4:11022843-11023616 REVERSE LENGTH=257 |