MLOC_57145 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains130.567111.822134.5130.879
LEAShoots from the seedlings (10 cm shoot stage)18.423627.888820.110520.0082
INF1Young developing inflorescences (5mm)2.697682.87963.340912.71222
INF2Developing inflorescences (1-1.5 cm)15.988910.189416.420316.0636
ROORoots from the seedlings (10 cm shoot stage)144.23113.064110.324155.379
NODDeveloping tillers at six leaf stage, 3rd internode78.8502106.06117.4273338.62
CAR5Developing grain, bracts removed (5 DPA)65.872562.927162.482767.6858
CAR15Developing grain, bracts removed (15 DPA)1.759581.275111.321573.77745



CDS Structure of MLOC_57145






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57145.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358110NoneNoneNoneNone
MLOC_57145.2CUST_3709_PI427708080AvailableAvailablecontig_41458 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g39770.1 -2 0.0 815 392/423 (93%) 13105.m04194 protein aminotransferase, putative, expressed
TAIR PP10 AT3G08860.1 -2 0.0 694 324/423 (77%) | Symbols: PYD4 | PYRIMIDINE 4 | chr3:2696754-2699087 REVERSE LENGTH=481