- Predicted Gene MLOC_57142
MLOC_57142 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57142_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57142_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.60311 | 2.41125 | 2.18872 | 2.56345 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.48165 | 9.22765 | 12.3997 | 8.05104 |
INF1 | Young developing inflorescences (5mm) | 0.998808 | 1.8678 | 1.47962 | 1.38727 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.73867 | 1.65964 | 2.13094 | 2.16007 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.87184 | 3.94779 | 4.64806 | 5.38715 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.21946 | 3.31785 | 6.21371 | 13.0144 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.10838 | 1.53316 | 0.9886 | 1.37414 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.520022 | 0.308105 | 0.443454 | 1.08284 |
CDS Structure of MLOC_57142
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57142.7
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g52450.1 |
-2 |
2e-120 |
355 |
205/271 (76%) |
13103.m05712 protein GATA transcription factor 25, putative, expressed |
TAIR PP10 |
AT1G51600.2 |
-2 |
6e-46 |
162 |
98/215 (46%) |
| Symbols: ZML2, TIFY2A, GATA28 | ZIM-LIKE 2 | chr1:19133176-19135252 FORWARD LENGTH=302 |