- Predicted Gene MLOC_57141
MLOC_57141 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 5.55684 | 4.66388 | 5.69625 | 4.51561 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.59059 | 6.51781 | 8.98024 | 4.60474 |
INF1 | Young developing inflorescences (5mm) | 5.35738 | 4.34378 | 6.3738 | 3.80272 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.83379 | 3.85483 | 6.3932 | 4.57092 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.0006 | 5.6026 | 7.15588 | 6.57121 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.56504 | 6.28268 | 6.46216 | 19.1795 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.52601 | 4.46892 | 6.22852 | 4.51993 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.09577 | 0.90734 | 1.50052 | 2.17294 |
CDS Structure of MLOC_57141
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57141.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g52430.1 |
+3 |
7e-75 |
238 |
116/134 (87%) |
13103.m05711 protein mitochondrial carrier protein, putative, expressed |
TAIR PP10 |
AT5G66380.1 |
+3 |
2e-53 |
181 |
86/128 (67%) |
| Symbols: ATFOLT1, FOLT1 | folate transporter 1 | chr5:26513645-26515533 REVERSE LENGTH=308 |