MLOC_57141 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.556844.663885.696254.51561
LEAShoots from the seedlings (10 cm shoot stage)2.590596.517818.980244.60474
INF1Young developing inflorescences (5mm)5.357384.343786.37383.80272
INF2Developing inflorescences (1-1.5 cm)4.833793.854836.39324.57092
ROORoots from the seedlings (10 cm shoot stage)7.00065.60267.155886.57121
NODDeveloping tillers at six leaf stage, 3rd internode5.565046.282686.4621619.1795
CAR5Developing grain, bracts removed (5 DPA)5.526014.468926.228524.51993
CAR15Developing grain, bracts removed (15 DPA)1.095770.907341.500522.17294



CDS Structure of MLOC_57141






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57141.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57141.1CUST_7885_PI427708083AvailableAvailablecontig_41456 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g52430.1 +3 7e-75 238 116/134 (87%) 13103.m05711 protein mitochondrial carrier protein, putative, expressed
TAIR PP10 AT5G66380.1 +3 2e-53 181 86/128 (67%) | Symbols: ATFOLT1, FOLT1 | folate transporter 1 | chr5:26513645-26515533 REVERSE LENGTH=308