MLOC_57114 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.58762.079412.031732.44371
LEAShoots from the seedlings (10 cm shoot stage)2.652931.109581.783861.59788
INF1Young developing inflorescences (5mm)2.453642.215192.577132.09495
INF2Developing inflorescences (1-1.5 cm)2.066571.576041.653032.01632
ROORoots from the seedlings (10 cm shoot stage)3.16263.014212.235333.52855
NODDeveloping tillers at six leaf stage, 3rd internode2.083842.334112.872917.71046
CAR5Developing grain, bracts removed (5 DPA)2.456062.497092.357632.48803
CAR15Developing grain, bracts removed (15 DPA)0.3953990.5438710.5789611.23584



CDS Structure of MLOC_57114






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57114.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57114.4CUST_13633_PI427708080AvailableAvailablecontig_41434 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g14490.2 +2 7e-82 263 150/271 (55%) 13106.m01608 protein calmodulin-binding heat-shock protein, putative, expressed
TAIR PP10 AT3G49050.1 +2 2e-101 313 176/249 (71%) alpha/beta-Hydrolases superfamily protein | chr3:18181498-18183613 FORWARD LENGTH=477