MLOC_57111 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2483260.2039930.6401950.330218
LEAShoots from the seedlings (10 cm shoot stage)0.4129961.474043.49381.42464
INF1Young developing inflorescences (5mm)0.3895950.1580080.7674520.346911
INF2Developing inflorescences (1-1.5 cm)0.4667520.4146070.252240.443647
ROORoots from the seedlings (10 cm shoot stage)1.242130.9937780.6065451.16061
NODDeveloping tillers at six leaf stage, 3rd internode0.9667750.9252060.7971352.42521
CAR5Developing grain, bracts removed (5 DPA)0.2705730.1457680.2422640.214371
CAR15Developing grain, bracts removed (15 DPA)0.6305470.6671830.3608811.42899



CDS Structure of MLOC_57111






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57111.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252275.1NoneNoneNoneNone
MLOC_57111.1CUST_3704_PI427708080AvailableAvailablecontig_41432 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g05700.1 -1 9e-13 67 39/101 (39%) 13103.m00615 protein expressed protein
TAIR PP10None-----