- Predicted Gene MLOC_57109
MLOC_57109 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57109_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57109_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.67008 | 4.74718 | 4.54934 | 3.63055 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.32282 | 7.25892 | 7.25798 | 5.79515 |
INF1 | Young developing inflorescences (5mm) | 13.7078 | 12.56 | 12.2314 | 9.47939 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.6879 | 14.4951 | 13.6118 | 14.0472 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.28204 | 4.82561 | 3.64831 | 4.73725 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.07009 | 3.43446 | 4.10137 | 11.4545 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.19973 | 6.97474 | 7.95567 | 6.56001 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.75109 | 3.45853 | 3.08553 | 6.94962 |
CDS Structure of MLOC_57109
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57109.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g05690.1 |
+2 |
5e-135 |
437 |
306/751 (41%) |
13103.m00614 protein ZOS3-03 - C2H2 zinc finger protein, expressed |
TAIR PP10 |
AT5G04240.1 |
+2 |
5e-74 |
272 |
235/826 (28%) |
| Symbols: ELF6 | Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein | chr5:1169544-1174638 FORWARD LENGTH=1340 |