MLOC_57106 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.802314.452464.468534.27138
LEAShoots from the seedlings (10 cm shoot stage)4.009754.726956.767423.8122
INF1Young developing inflorescences (5mm)1.467611.471261.266121.21209
INF2Developing inflorescences (1-1.5 cm)4.50824.54224.530224.94005
ROORoots from the seedlings (10 cm shoot stage)12.52055.645929.965887.00677
NODDeveloping tillers at six leaf stage, 3rd internode0.3878070.3534730.4281440.875661
CAR5Developing grain, bracts removed (5 DPA)5.139124.972914.314674.62343
CAR15Developing grain, bracts removed (15 DPA)1.595061.706761.496184.015



CDS Structure of MLOC_57106






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57106.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356916NoneNoneNoneNone
MLOC_57106.1CUST_3703_PI427708080AvailableAvailablecontig_41429 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g01520.1 -2 9e-110 341 213/244 (87%) 13104.m00063 protein expressed protein
TAIR PP10 AT1G18010.1 -2 7e-171 500 289/439 (66%) Major facilitator superfamily protein | chr1:6199980-6201359 FORWARD LENGTH=459