- Predicted Gene MLOC_57106
MLOC_57106 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.80231 | 4.45246 | 4.46853 | 4.27138 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.00975 | 4.72695 | 6.76742 | 3.8122 |
INF1 | Young developing inflorescences (5mm) | 1.46761 | 1.47126 | 1.26612 | 1.21209 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.5082 | 4.5422 | 4.53022 | 4.94005 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.5205 | 5.64592 | 9.96588 | 7.00677 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.387807 | 0.353473 | 0.428144 | 0.875661 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.13912 | 4.97291 | 4.31467 | 4.62343 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.59506 | 1.70676 | 1.49618 | 4.015 |
CDS Structure of MLOC_57106
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57106.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g01520.1 |
-2 |
9e-110 |
341 |
213/244 (87%) |
13104.m00063 protein expressed protein |
TAIR PP10 |
AT1G18010.1 |
-2 |
7e-171 |
500 |
289/439 (66%) |
Major facilitator superfamily protein | chr1:6199980-6201359 FORWARD LENGTH=459 |