- Predicted Gene MLOC_57082
MLOC_57082 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.595253 | 0.249145 | 0.293777 | 0.365031 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.343771 | 0.0569668 | 0.339958 | 0.206613 |
| INF1 | Young developing inflorescences (5mm) | 0.437867 | 0.424609 | 0.27681 | 0.350723 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.371455 | 0.548654 | 0.377946 | 0.524438 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.274784 | 0.335379 | 0.50137 | 0.422892 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.27944 | 2.04434 | 3.81604 | 7.13178 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0314233 | 0.0895986 | 0.0605231 | 0.06663 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0.0600235 | 0.0463808 |
CDS Structure of MLOC_57082
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57082.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g45750.1 |
+2 |
1e-59 |
199 |
95/107 (89%) |
13103.m04920 protein DUF260 domain containing protein, putative, expressed |
| TAIR PP10 |
AT1G31320.1 |
+2 |
4e-51 |
174 |
80/107 (75%) |
| Symbols: LBD4 | LOB domain-containing protein 4 | chr1:11213107-11214032 FORWARD LENGTH=172 |