- Predicted Gene MLOC_57081
MLOC_57081 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.41906 | 4.7002 | 4.94004 | 4.86682 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 33.3624 | 45.1865 | 53.3493 | 34.1926 |
| INF1 | Young developing inflorescences (5mm) | 2.32048 | 2.51791 | 3.45065 | 2.53386 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.67996 | 1.96236 | 1.65888 | 2.11671 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.100654 | 0.337189 | 1.04485 | 0.455888 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.09673 | 11.5587 | 17.2525 | 33.3383 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.7287 | 12.6924 | 12.3212 | 12.6538 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.700773 | 0.724313 | 0.608574 | 1.79265 |
CDS Structure of MLOC_57081
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57081.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g41630.1 |
+3 |
3e-51 |
173 |
98/174 (56%) |
13107.m04337 protein hypothetical protein |
| TAIR PP10 |
AT4G16410.1 |
+3 |
1e-36 |
133 |
60/104 (58%) |
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF751 (InterPro:IPR008470); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:9262019-9262576 REVERSE LENGTH=185 |