- Predicted Gene MLOC_57069
MLOC_57069 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57069_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57069_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.33502 | 3.86964 | 4.58363 | 3.32318 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.3649 | 22.4998 | 30.0626 | 15.2376 |
INF1 | Young developing inflorescences (5mm) | 6.76259 | 7.33591 | 9.38383 | 4.9331 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.98552 | 6.50044 | 6.83293 | 5.91847 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.54665 | 3.53409 | 2.89042 | 3.30702 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.38511 | 4.25923 | 6.47361 | 12.4636 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.22316 | 6.52315 | 6.17543 | 4.98863 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.54354 | 1.90721 | 2.37374 | 3.09135 |
CDS Structure of MLOC_57069
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57069.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g20990.1 |
+3 |
0.0 |
591 |
287/329 (87%) |
13104.m01936 protein tRNA-dihydrouridine synthase, putative, expressed |
TAIR PP10 |
AT3G63510.2 |
+3 |
3e-151 |
445 |
206/312 (66%) |
FMN-linked oxidoreductases superfamily protein | chr3:23450615-23452682 FORWARD LENGTH=386 |