MLOC_57068 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.024733800.03069390.0444943
INF2Developing inflorescences (1-1.5 cm)0.0262504000.0329062
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)3.532813.946652.820743.22345
CAR15Developing grain, bracts removed (15 DPA)15.796114.50119.542838.8507



CDS Structure of MLOC_57068






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57068.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57068.1CUST_13625_PI427708080AvailableAvailablecontig_41394 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g48300.1 +3 8e-119 361 275/373 (74%) 13105.m05132 protein purine permease, putative, expressed
TAIR PP10 AT1G30840.2 +3 5e-50 179 151/321 (47%) | Symbols: PUP4 | purine permease 4 | chr1:10974581-10975729 FORWARD LENGTH=382