MLOC_57064 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.726484.277663.39553.13118
LEAShoots from the seedlings (10 cm shoot stage)5.178693.974733.446633.42399
INF1Young developing inflorescences (5mm)9.7269110.09411.86228.13961
INF2Developing inflorescences (1-1.5 cm)17.310417.454415.624517.1282
ROORoots from the seedlings (10 cm shoot stage)1.306263.692092.97173.55155
NODDeveloping tillers at six leaf stage, 3rd internode2.74034.973955.2693115.1141
CAR5Developing grain, bracts removed (5 DPA)9.960119.523849.570928.5123
CAR15Developing grain, bracts removed (15 DPA)3.957123.16593.683567.6305



CDS Structure of MLOC_57064






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57064.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372751NoneNoneNoneNone
MLOC_57064.4CUST_18153_PI427708080AvailableAvailablecontig_136575 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g37840.1 -2 0.0 1070 562/829 (68%) 13109.m03758 protein carbohydrate binding protein, putative
TAIR PP10 AT1G11410.1 -2 2e-172 554 336/844 (40%) S-locus lectin protein kinase family protein | chr1:3841286-3844284 FORWARD LENGTH=845