- Predicted Gene MLOC_57042
MLOC_57042 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57042_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57042_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.98836 | 6.86408 | 6.15503 | 7.83704 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 17.7165 | 26.4114 | 31.5785 | 23.5462 |
INF1 | Young developing inflorescences (5mm) | 3.87934 | 4.03382 | 3.90997 | 3.73963 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.56912 | 3.00207 | 2.6993 | 3.52782 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.9966 | 4.20197 | 2.90725 | 5.76212 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.44132 | 7.32479 | 10.5308 | 26.2008 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.6267 | 7.72317 | 8.03712 | 9.0037 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.87409 | 2.32882 | 1.58241 | 5.34462 |
CDS Structure of MLOC_57042
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57042.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g08930.1 |
+2 |
5e-131 |
392 |
204/253 (81%) |
13105.m00990 protein chloroplast lumen common family protein, putative, expressed |
TAIR PP10 |
AT4G39470.1 |
+2 |
1e-67 |
224 |
103/219 (47%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:18359735-18361165 REVERSE LENGTH=341 |