- Predicted Gene MLOC_57021
MLOC_57021 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 6.82504 | 11.6179 | 9.9168 | 11.1379 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 37.0186 | 81.2373 | 74.8724 | 59.2966 |
INF1 | Young developing inflorescences (5mm) | 18.8803 | 20.7436 | 20.6072 | 17.892 |
INF2 | Developing inflorescences (1-1.5 cm) | 31.0826 | 18.9141 | 21.3658 | 27.4051 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.85077 | 12.4091 | 11.8205 | 15.8065 |
NOD | Developing tillers at six leaf stage, 3rd internode | 28.7352 | 31.3589 | 34.8587 | 111.811 |
CAR5 | Developing grain, bracts removed (5 DPA) | 16.9742 | 20.2346 | 23.6235 | 21.5885 |
CAR15 | Developing grain, bracts removed (15 DPA) | 14.3135 | 14.9629 | 14.546 | 36.3895 |
CDS Structure of MLOC_57021
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57021.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g36220.2 |
-2 |
0.0 |
729 |
404/598 (68%) |
13109.m07593 protein response regulator receiver domain containing protein, expressed |
TAIR PP10 |
AT5G24470.1 |
-2 |
3e-83 |
283 |
212/582 (36%) |
| Symbols: APRR5, PRR5 | pseudo-response regulator 5 | chr5:8356204-8358873 REVERSE LENGTH=667 |