MLOC_5701 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.17676 | 4.11846 | 5.14601 | 4.87723 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.40806 | 1.83721 | 1.83065 | 2.54745 |
| INF1 | Young developing inflorescences (5mm) | 0.128426 | 0.182239 | 0.101069 | 0.129917 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.24176 | 0.401744 | 0.280615 | 0.372741 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 12.9812 | 9.4254 | 9.66726 | 11.5509 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.2002 | 16.8988 | 0.0553973 | 38.3814 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.1412 | 10.4028 | 11.4647 | 12.6851 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.123484 | 0.0701827 | 0.0448622 | 0.22046 |
CDS Structure of MLOC_5701
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5701.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g15370.1 |
-1 |
0.0 |
804 |
457/542 (84%) |
13107.m01610 protein metal transporter Nramp6, putative, expressed |
| TAIR PP10 |
AT1G15960.1 |
-1 |
0.0 |
548 |
303/505 (60%) |
| Symbols: NRAMP6, ATNRAMP6 | NRAMP metal ion transporter 6 | chr1:5482202-5485066 REVERSE LENGTH=527 |
