- Predicted Gene MLOC_56971
MLOC_56971 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56971_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.71138 | 1.83342 | 2.18704 | 1.61412 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.59644 | 1.57818 | 1.51514 | 1.19801 |
INF1 | Young developing inflorescences (5mm) | 3.72643 | 3.23372 | 4.2228 | 2.70086 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.23626 | 5.02236 | 5.06666 | 4.81426 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.69775 | 6.47355 | 7.30514 | 6.40069 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.826486 | 1.39899 | 1.58589 | 4.3085 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.41784 | 1.73489 | 1.77058 | 1.6247 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.00536 | 4.40027 | 3.72072 | 7.13434 |
CDS Structure of MLOC_56971
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56971.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g01966.1 |
+3 |
2e-148 |
447 |
244/363 (67%) |
13106.m00108 protein auxin-induced protein 5NG4, putative, expressed |
TAIR PP10 |
AT3G30340.1 |
+3 |
9e-83 |
273 |
138/327 (42%) |
nodulin MtN21 /EamA-like transporter family protein | chr3:11956626-11958969 FORWARD LENGTH=364 |