MLOC_56950 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.487795.841495.908290
LEAShoots from the seedlings (10 cm shoot stage)3.538132.599543.262280
INF1Young developing inflorescences (5mm)2.884123.538724.305330
INF2Developing inflorescences (1-1.5 cm)2.183142.83792.171560
ROORoots from the seedlings (10 cm shoot stage)7.170328.054285.82410
NODDeveloping tillers at six leaf stage, 3rd internode4.554015.402215.155040
CAR5Developing grain, bracts removed (5 DPA)2.715792.498112.444210
CAR15Developing grain, bracts removed (15 DPA)0.2763240.2473310.4199960



CDS Structure of MLOC_56950






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56950.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_56950.3CUST_13604_PI427708080AvailableNonecontig_41273 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g49380.1 -3 0.0 629 326/357 (91%) 13101.m05134 protein lipase, putative, expressed
TAIR PP10 AT1G77420.1 -3 1e-142 421 214/352 (61%) alpha/beta-Hydrolases superfamily protein | chr1:29093641-29095442 FORWARD LENGTH=382