- Predicted Gene MLOC_56933
MLOC_56933 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 54.4416 | 38.0638 | 35.2882 | 44.175 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.9377 | 1.64001 | 2.64105 | 4.04517 |
| INF1 | Young developing inflorescences (5mm) | 79.9318 | 91.9563 | 92.6408 | 84.9428 |
| INF2 | Developing inflorescences (1-1.5 cm) | 58.0079 | 82.1611 | 59.6033 | 84.0813 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 22.8772 | 20.6212 | 25.1835 | 24.8951 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.18392 | 3.02548 | 0.226906 | 5.99359 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 22.0115 | 26.0922 | 28.733 | 28.5448 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.26651 | 0.491057 | 1.69425 | 2.86812 |
CDS Structure of MLOC_56933
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56933.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g16650.1 |
-2 |
2e-87 |
267 |
127/136 (93%) |
13101.m01863 protein ubiquitin-conjugating enzyme, putative, expressed |
| TAIR PP10 |
AT1G50490.1 |
-2 |
5e-71 |
223 |
107/137 (78%) |
| Symbols: UBC20 | ubiquitin-conjugating enzyme 20 | chr1:18705005-18706303 REVERSE LENGTH=180 |