- Predicted Gene MLOC_56927
MLOC_56927 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.14888 | 3.00637 | 2.52136 | 2.91175 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.24457 | 8.78633 | 5.75913 | 6.32059 |
| INF1 | Young developing inflorescences (5mm) | 14.1999 | 13.8676 | 13.1963 | 12.1908 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.1506 | 18.3327 | 14.1625 | 18.6808 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.877521 | 2.74757 | 2.55838 | 3.5482 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0440573 | 0.0291144 | 0.00669483 | 0.110333 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.21857 | 7.0574 | 7.74081 | 7.89698 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 14.5851 | 13.9297 | 16.456 | 34.6701 |
CDS Structure of MLOC_56927
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56927.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g04530.1 |
-2 |
2e-162 |
473 |
277/345 (80%) |
13105.m00458 protein IF, putative, expressed |
| TAIR PP10 |
AT5G26770.1 |
-2 |
2e-97 |
305 |
180/333 (54%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:9407981-9409735 REVERSE LENGTH=335 |