MLOC_56925 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains49.125947.0548.14449.8856
LEAShoots from the seedlings (10 cm shoot stage)38.850930.967836.016232.1724
INF1Young developing inflorescences (5mm)51.610940.155536.573738.374
INF2Developing inflorescences (1-1.5 cm)31.234433.770735.454137.5232
ROORoots from the seedlings (10 cm shoot stage)52.696359.213347.140572.6881
NODDeveloping tillers at six leaf stage, 3rd internode62.633832.050635.8524117.431
CAR5Developing grain, bracts removed (5 DPA)62.311455.674256.02858.6056
CAR15Developing grain, bracts removed (15 DPA)18.331915.302716.532839.2095



CDS Structure of MLOC_56925






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56925.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372044NoneNoneNoneNone
MLOC_56925.1CUST_3681_PI427708080AvailableAvailablecontig_41249 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g04520.1 +1 0.0 659 335/361 (93%) 13105.m00456 protein protein kinase, putative, expressed
TAIR PP10 AT2G47060.2 +1 0.0 548 282/361 (78%) Protein kinase superfamily protein | chr2:19333116-19334759 REVERSE LENGTH=365