MLOC_56911 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1022.36736.299703.915869.819
LEAShoots from the seedlings (10 cm shoot stage)431.592223.518233.385269.935
INF1Young developing inflorescences (5mm)1102.351148.531202.061069.75
INF2Developing inflorescences (1-1.5 cm)769.037833.389872.238986.193
ROORoots from the seedlings (10 cm shoot stage)748.848641.201944.252919.106
NODDeveloping tillers at six leaf stage, 3rd internode74.719759.667126.952265.702
CAR5Developing grain, bracts removed (5 DPA)328.818342.821324.118355.017
CAR15Developing grain, bracts removed (15 DPA)108.794106.70490.3008258.401



CDS Structure of MLOC_56911






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56911.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359468NoneNoneNoneNone
MLOC_56911.1CUST_3679_PI427708080AvailableAvailablecontig_41238 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g48320.1 -1 4e-61 189 92/92 (100%) 13105.m05135 protein 60S ribosomal protein L37a, putative, expressed
TAIR PP10 AT3G10950.1 -1 8e-58 180 86/92 (93%) Zinc-binding ribosomal protein family protein | chr3:3423893-3424566 FORWARD LENGTH=92