- Predicted Gene MLOC_56905
MLOC_56905 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.4162 | 3.14328 | 3.23278 | 2.59524 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.51592 | 1.22701 | 1.12748 | 1.11191 |
INF1 | Young developing inflorescences (5mm) | 2.58671 | 1.89001 | 2.80976 | 1.88327 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.97458 | 2.18506 | 1.8904 | 2.16784 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.03634 | 6.12936 | 4.72608 | 6.65799 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.91814 | 2.45752 | 1.15895 | 7.62921 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.1505 | 1.40423 | 1.49631 | 1.2699 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.282134 | 0.438056 | 0.238327 | 0.697557 |
CDS Structure of MLOC_56905
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56905.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g05620.1 |
-2 |
0.0 |
1363 |
710/995 (71%) |
13101.m00542 protein NBS-LRR disease resistance protein, putative |
TAIR PP10 |
AT3G14470.1 |
-2 |
6e-75 |
272 |
251/938 (27%) |
NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054 |